HL_7QGR_064

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

7QGR|1|N|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGR_064 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.1506

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7QGR|1|N|C|1092
7QGR|1|N|G|1093
7QGR|1|N|U|1094
7QGR|1|N|A|1095
7QGR|1|N|A|1096
7QGR|1|N|U|1097
7QGR|1|N|A|1098
7QGR|1|N|G|1099

Current chains

Chain N

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L6

Chain V

50S ribosomal protein L11

Chain r

50S ribosomal protein L36