HL_7QGR_071

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

7QGR|1|N|A|1453, 7QGR|1|N|C|1454

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGR_071 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1726

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7QGR|1|N|C|1451
7QGR|1|N|G|1452
7QGR|1|N|A|1453
7QGR|1|N|C|1454
7QGR|1|N|G|1455
7QGR|1|N|G|1456
7QGR|1|N|U|1457
7QGR|1|N|U|1458
7QGR|1|N|G|1459

Current chains

Chain N

23S rRNA

Nearby chains

Chain a

50S ribosomal protein L17