HL_7QGU_006

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7QGU|1|A|A|199

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_006 not in the Motif Atlas

Homologous match to HL_5J7L_139

Geometric discrepancy: 0.1721

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7QGU|1|A|G|197
7QGU|1|A|A|198
7QGU|1|A|A|199
7QGU|1|A|A|200
7QGU|1|A|C|201
7QGU|1|A|A|202
7QGU|1|A|U|203
7QGU|1|A|C|204

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain Y

50S ribosomal protein L28