HL_7QGU_014

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7QGU|1|A|G|458

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_014 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.0862

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7QGU|1|A|G|457
7QGU|1|A|G|458
7QGU|1|A|A|459
7QGU|1|A|C|460
7QGU|1|A|C|461
7QGU|1|A|A|462
7QGU|1|A|U|463
7QGU|1|A|C|464

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15