HL_7QGU_026

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CCUACCG

Length

7 nucleotides

Bulged bases

7QGU|1|A|A|935

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_026 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.289

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7QGU|1|A|C|932
7QGU|1|A|C|933
7QGU|1|A|U|934
7QGU|1|A|A|935
7QGU|1|A|C|936
7QGU|1|A|C|937
7QGU|1|A|G|938

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

Small subunit ribosomal RNA; SSU rRNA

Chain r

30S ribosomal protein S13

Chain x

30S ribosomal protein S19