HL_7QGU_037

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGUAUUGGAUAU

Length

12 nucleotides

Bulged bases

7QGU|1|A|A|1499, 7QGU|1|A|U|1500, 7QGU|1|A|A|1506

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_037 not in the Motif Atlas

Geometric match to HL_5J7L_200

Geometric discrepancy: 0.3325

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7QGU|1|A|G|1496
7QGU|1|A|G|1497
7QGU|1|A|U|1498
7QGU|1|A|A|1499
7QGU|1|A|U|1500
7QGU|1|A|U|1501
7QGU|1|A|G|1502
7QGU|1|A|G|1503
7QGU|1|A|A|1504
7QGU|1|A|U|1505
7QGU|1|A|A|1506
7QGU|1|A|U|1507

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17