HL_7QH6_007
3D structure
- PDB id
- 7QH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- ACAGCUAAAGAU
- Length
- 12 nucleotides
- Bulged bases
- 7QH6|1|A|A|1931, 7QH6|1|A|U|1934, 7QH6|1|A|A|1935, 7QH6|1|A|A|1971, 7QH6|1|A|A|1974
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QH6_007 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.2447
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.10
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7QH6|1|A|A|1929
7QH6|1|A|C|1930
7QH6|1|A|A|1931
7QH6|1|A|G|1932
7QH6|1|A|C|1933
7QH6|1|A|U|1934
7QH6|1|A|A|1935
7QH6|1|A|A|1971
7QH6|1|A|A|1972
7QH6|1|A|G|1973
7QH6|1|A|A|1974
7QH6|1|A|U|1975
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: