HL_7QH6_020
3D structure
- PDB id
- 7QH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7QH6|1|A|A|2500, 7QH6|1|A|C|2501, 7QH6|1|A|C|2502, 7QH6|1|A|A|2504
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QH6_020 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1874
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7QH6|1|A|U|2497
7QH6|1|A|U|2498
7QH6|1|A|U|2499
7QH6|1|A|A|2500
7QH6|1|A|C|2501
7QH6|1|A|C|2502
7QH6|1|A|A|2503
7QH6|1|A|A|2504
7QH6|1|A|A|2505
7QH6|1|A|A|2506
7QH6|1|A|A|2507
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: