HL_7QH7_029

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

7QH7|1|A|G|3016

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH7_029 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1913

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7QH7|1|A|U|3015
7QH7|1|A|G|3016
7QH7|1|A|C|3017
7QH7|1|A|A|3018
7QH7|1|A|G|3019
7QH7|1|A|C|3020
7QH7|1|A|C|3021
7QH7|1|A|G|3022

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial