HL_7QI4_025
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CUUAA(1MA)UAG
- Length
- 9 nucleotides
- Bulged bases
- 7QI4|1|A|U|2618
- QA status
- Modified nucleotides: 1MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QI4_025 not in the Motif Atlas
- Geometric match to HL_5TBW_050
- Geometric discrepancy: 0.178
- The information below is about HL_5TBW_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7QI4|1|A|C|2612
7QI4|1|A|U|2613
7QI4|1|A|U|2614
7QI4|1|A|A|2615
7QI4|1|A|A|2616
7QI4|1|A|1MA|2617
7QI4|1|A|U|2618
7QI4|1|A|A|2619
7QI4|1|A|G|2620
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- 39S ribosomal protein L14, mitochondrial
Coloring options: