HL_7QI4_050
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GA(5MU)UAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7QI4|1|AA|U|1081
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QI4_050 not in the Motif Atlas
- Geometric match to HL_4LFB_017
- Geometric discrepancy: 0.0672
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7QI4|1|AA|G|1074
7QI4|1|AA|A|1075
7QI4|1|AA|5MU|1076
7QI4|1|AA|U|1077
7QI4|1|AA|A|1078
7QI4|1|AA|G|1079
7QI4|1|AA|A|1080
7QI4|1|AA|U|1081
7QI4|1|AA|A|1082
7QI4|1|AA|C|1083
7QI4|1|AA|C|1084
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AQ
- MRPS21 isoform 1
- Chain Ax
- Transfer RNA; tRNA
- Chain Az
- mRNA
Coloring options: