HL_7QI4_056

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UACCCCA

Length

7 nucleotides

Bulged bases

7QI4|1|AA|C|1377, 7QI4|1|AA|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI4_056 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1486

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7QI4|1|AA|U|1373
7QI4|1|AA|A|1374
7QI4|1|AA|C|1375
7QI4|1|AA|C|1376
7QI4|1|AA|C|1377
7QI4|1|AA|C|1378
7QI4|1|AA|A|1379

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial