HL_7QI5_066
3D structure
- PDB id
- 7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QI5_066 not in the Motif Atlas
- Geometric match to HL_4V9Q_215
- Geometric discrepancy: 0.1988
- The information below is about HL_4V9Q_215
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
7QI5|1|Ax|G|53
7QI5|1|Ax|U|54
7QI5|1|Ax|U|55
7QI5|1|Ax|C|56
7QI5|1|Ax|A|57
7QI5|1|Ax|A|58
7QI5|1|Ax|U|59
7QI5|1|Ax|U|60
7QI5|1|Ax|C|61
Current chains
- Chain Ax
- P/P-tRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: