HL_7QI6_012

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GGAACAGC

Length

8 nucleotides

Bulged bases

7QI6|1|A|A|2110, 7QI6|1|A|G|2113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI6_012 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.1142

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7QI6|1|A|G|2107
7QI6|1|A|G|2108
7QI6|1|A|A|2109
7QI6|1|A|A|2110
7QI6|1|A|C|2111
7QI6|1|A|A|2112
7QI6|1|A|G|2113
7QI6|1|A|C|2114

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain I

39S ribosomal protein L10, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain o

Ribosomal protein 63, mitochondrial