HL_7QI6_040

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

7QI6|1|AA|U|656

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI6_040 not in the Motif Atlas

Geometric match to HL_4LFB_001

Geometric discrepancy: 0.1136

The information below is about HL_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73535.1

Basepair signature

cWW-tHW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7QI6|1|AA|U|654
7QI6|1|AA|U|655
7QI6|1|AA|U|656
7QI6|1|AA|G|657
7QI6|1|AA|G|658
7QI6|1|AA|U|659
7QI6|1|AA|C|660
7QI6|1|AA|C|661
7QI6|1|AA|U|662
7QI6|1|AA|A|663
7QI6|1|AA|G|664

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain Az

mRNA