HL_7QI6_060

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

UGG(MA6)(MA6)A

Length

6 nucleotides

Bulged bases

7QI6|1|AA|G|1582

QA status

Modified nucleotides: MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QI6_060 not in the Motif Atlas

Geometric match to HL_4V88_222

Geometric discrepancy: 0.1072

The information below is about HL_4V88_222

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7QI6|1|AA|U|1580
7QI6|1|AA|G|1581
7QI6|1|AA|G|1582
7QI6|1|AA|MA6|1583
7QI6|1|AA|MA6|1584
7QI6|1|AA|A|1585

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Aurora kinase A-interacting protein

Chain AI

28S ribosomal protein S11, mitochondrial