HL_7QIZ_034
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GUUAAAAUUC
- Length
- 10 nucleotides
- Bulged bases
- 7QIZ|1|2|U|1611, 7QIZ|1|2|U|1612
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QIZ_034 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.0949
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7QIZ|1|2|G|1604
7QIZ|1|2|U|1605
7QIZ|1|2|U|1606
7QIZ|1|2|A|1607
7QIZ|1|2|A|1608
7QIZ|1|2|A|1609
7QIZ|1|2|A|1610
7QIZ|1|2|U|1611
7QIZ|1|2|U|1612
7QIZ|1|2|C|1613
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain T
- Ribosomal protein L19
- Chain Z
- Ribosomal_L23eN domain-containing protein
- Chain i
- 60S ribosomal protein eL34
- Chain n
- 60S ribosomal protein eL39
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