HL_7QIZ_096

3D structure

PDB id

7QIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Specific features and methylation sites of a plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GACUGAGAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QIZ|1|S2|G|1240
7QIZ|1|S2|A|1241
7QIZ|1|S2|C|1242
7QIZ|1|S2|U|1243
7QIZ|1|S2|G|1244
7QIZ|1|S2|A|1245
7QIZ|1|S2|G|1246
7QIZ|1|S2|A|1247
7QIZ|1|S2|G|1248
7QIZ|1|S2|C|1249

Current chains

Chain S2

18S

Nearby chains

Chain QA

40S ribosomal protein uS19

Chain XA

40S ribosomal protein uS14