HL_7QP6_016

3D structure

PDB id

7QP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in open state (h48S AUG open)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UCUCGGCGGCCCGAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP6|1|A|U|747
7QP6|1|A|C|748
7QP6|1|A|U|749
7QP6|1|A|C|750
7QP6|1|A|G|751
7QP6|1|A|G|752
7QP6|1|A|C|753
7QP6|1|A|G|788
7QP6|1|A|G|789
7QP6|1|A|C|790
7QP6|1|A|C|791
7QP6|1|A|C|792
7QP6|1|A|G|793
7QP6|1|A|A|794
7QP6|1|A|A|795

Current chains

Chain A

18S rRNA

Nearby chains

Chain C

40S ribosomal protein S4, X isoform

Chain G

40S ribosomal protein S7

Chain S

40S ribosomal protein S6