HL_7QP6_018

3D structure

PDB id

7QP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in open state (h48S AUG open)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

7QP6|1|A|G|836, 7QP6|1|A|G|838, 7QP6|1|A|C|840

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP6|1|A|C|833
7QP6|1|A|C|834
7QP6|1|A|C|835
7QP6|1|A|G|836
7QP6|1|A|A|837
7QP6|1|A|G|838
7QP6|1|A|C|839
7QP6|1|A|C|840
7QP6|1|A|G|841

Current chains

Chain A

18S rRNA

Nearby chains

Chain 1

Eukaryotic translation initiation factor 3 subunit B

Chain C

40S ribosomal protein S4, X isoform

Chain T

40S ribosomal protein S24