HL_7QP6_019

3D structure

PDB id

7QP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in open state (h48S AUG open)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

7QP6|1|A|G|891, 7QP6|1|A|U|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP6|1|A|U|885
7QP6|1|A|A|886
7QP6|1|A|U|887
7QP6|1|A|U|888
7QP6|1|A|U|889
7QP6|1|A|U|890
7QP6|1|A|G|891
7QP6|1|A|U|892
7QP6|1|A|U|893
7QP6|1|A|G|894
7QP6|1|A|G|895
7QP6|1|A|U|896
7QP6|1|A|U|897
7QP6|1|A|U|898
7QP6|1|A|U|899
7QP6|1|A|C|900
7QP6|1|A|G|901

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6