HL_7QP6_035

3D structure

PDB id

7QP6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in open state (h48S AUG open)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CCCCGCCGGGGGCCCUGGCGGAGCG

Length

25 nucleotides

Bulged bases

7QP6|1|A|C|1753, 7QP6|1|A|C|1774, 7QP6|1|A|C|1783

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP6|1|A|C|1750
7QP6|1|A|C|1751
7QP6|1|A|C|1752
7QP6|1|A|C|1753
7QP6|1|A|G|1754
7QP6|1|A|C|1755
7QP6|1|A|C|1756
7QP6|1|A|G|1757
7QP6|1|A|G|1758
7QP6|1|A|G|1759
7QP6|1|A|G|1760
7QP6|1|A|G|1771
7QP6|1|A|C|1772
7QP6|1|A|C|1773
7QP6|1|A|C|1774
7QP6|1|A|U|1775
7QP6|1|A|G|1776
7QP6|1|A|G|1777
7QP6|1|A|C|1778
7QP6|1|A|G|1779
7QP6|1|A|G|1780
7QP6|1|A|A|1781
7QP6|1|A|G|1782
7QP6|1|A|C|1783
7QP6|1|A|G|1784

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6