HL_7QP7_036

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUG(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

7QP7|1|A|G|1849

QA status

Modified nucleotides: MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QP7_036 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1606

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7QP7|1|A|G|1847
7QP7|1|A|U|1848
7QP7|1|A|G|1849
7QP7|1|A|MA6|1850
7QP7|1|A|MA6|1851
7QP7|1|A|C|1852

Current chains

Chain A

18S rRNA

Nearby chains

Chain 9

60S ribosomal protein L41