HL_7QQ3_011
3D structure
- PDB id
- 7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7QQ3|1|I|G|329, 7QQ3|1|I|A|330, 7QQ3|1|I|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QQ3_011 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.0635
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7QQ3|1|I|G|327
7QQ3|1|I|U|328
7QQ3|1|I|G|329
7QQ3|1|I|A|330
7QQ3|1|I|C|331
7QQ3|1|I|A|332
7QQ3|1|I|G|333
7QQ3|1|I|C|334
7QQ3|1|I|C|335
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L4
- Chain c
- 50S ribosomal protein L24
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