HL_7QQ3_074

3D structure

PDB id

7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QQ3_074 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.307

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QQ3|1|I|G|2304
7QQ3|1|I|U|2305
7QQ3|1|I|C|2306
7QQ3|1|I|G|2307
7QQ3|1|I|G|2308
7QQ3|1|I|A|2309
7QQ3|1|I|C|2310
7QQ3|1|I|A|2311
7QQ3|1|I|U|2312

Current chains

Chain I

23S ribosomal RNA

Nearby chains