HL_7QV1_070

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7QV1|1|V|G|2780, 7QV1|1|V|C|2784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_070 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.2532

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7QV1|1|V|C|2774
7QV1|1|V|U|2775
7QV1|1|V|G|2776
7QV1|1|V|A|2777
7QV1|1|V|A|2778
7QV1|1|V|A|2779
7QV1|1|V|G|2780
7QV1|1|V|C|2781
7QV1|1|V|A|2782
7QV1|1|V|U|2783
7QV1|1|V|C|2784
7QV1|1|V|U|2785
7QV1|1|V|A|2786
7QV1|1|V|A|2787
7QV1|1|V|G|2788

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6