HL_7QV1_098

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7QV1|1|a|G|1104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_098 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1838

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.3

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

22

Unit IDs

7QV1|1|a|G|1099
7QV1|1|a|U|1100
7QV1|1|a|U|1101
7QV1|1|a|A|1102
7QV1|1|a|A|1103
7QV1|1|a|G|1104
7QV1|1|a|U|1105
7QV1|1|a|C|1106

Current chains

Chain a

16S ribosomal RNA

Nearby chains