HL_7QV1_099

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUUCAGUU

Length

8 nucleotides

Bulged bases

7QV1|1|a|C|1146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_099 not in the Motif Atlas

Geometric match to HL_8C3A_220

Geometric discrepancy: 0.3309

The information below is about HL_8C3A_220

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7QV1|1|a|A|1143
7QV1|1|a|U|1144
7QV1|1|a|U|1145
7QV1|1|a|C|1146
7QV1|1|a|A|1147
7QV1|1|a|G|1148
7QV1|1|a|U|1149
7QV1|1|a|U|1150

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9