HL_7QV1_106

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUGGAAAU

Length

9 nucleotides

Bulged bases

7QV1|1|V|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV1_106 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.5362

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QV1|1|V|G|2333
7QV1|1|V|U|2334
7QV1|1|V|U|2335
7QV1|1|V|G|2336
7QV1|1|V|G|2337
7QV1|1|V|A|2338
7QV1|1|V|A|2339
7QV1|1|V|A|2340
7QV1|1|V|U|2341

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5