HL_7QV3_103

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GAUCAGCAUGC

Length

11 nucleotides

Bulged bases

7QV3|1|a|U|1373

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_103 not in the Motif Atlas

Homologous match to HL_4LFB_030

Geometric discrepancy: 0.2067

The information below is about HL_4LFB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86432.2

Basepair signature

cWW-tWH-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

7QV3|1|a|G|1365
7QV3|1|a|A|1366
7QV3|1|a|U|1367
7QV3|1|a|C|1368
7QV3|1|a|A|1369
7QV3|1|a|G|1370
7QV3|1|a|C|1371
7QV3|1|a|A|1372
7QV3|1|a|U|1373
7QV3|1|a|G|1374
7QV3|1|a|C|1375

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14