HL_7QVP_043

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCCGAAAGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|G|1761
7QVP|1|L5|C|1762
7QVP|1|L5|C|1763
7QVP|1|L5|G|1764
7QVP|1|L5|A|1765
7QVP|1|L5|A|1766
7QVP|1|L5|A|1767
7QVP|1|L5|G|1769
7QVP|1|L5|A|1770
7QVP|1|L5|U|1771

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LJ

60S ribosomal protein L11

Chain SP

40S ribosomal protein S15

Chain SS

40S ribosomal protein S18