HL_7QVP_047

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACGGUGGCGCUAACC

Length

17 nucleotides

Bulged bases

7QVP|1|L5|G|1975, 7QVP|1|L5|G|1976, 7QVP|1|L5|U|1997

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|G|1968
7QVP|1|L5|G|1969
7QVP|1|L5|A|1970
7QVP|1|L5|C|1971
7QVP|1|L5|G|1972
7QVP|1|L5|G|1973
7QVP|1|L5|U|1974
7QVP|1|L5|G|1975
7QVP|1|L5|G|1976
7QVP|1|L5|C|1994
7QVP|1|L5|G|1995
7QVP|1|L5|C|1996
7QVP|1|L5|U|1997
7QVP|1|L5|A|1998
7QVP|1|L5|A|2017
7QVP|1|L5|C|2018
7QVP|1|L5|C|2019

Current chains

Chain L5

28S ribosomal RNA

Nearby chains