HL_7QVP_092

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

7QVP|1|L5|C|5023

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L5|C|5021
7QVP|1|L5|U|5022
7QVP|1|L5|C|5023
7QVP|1|L5|C|5024
7QVP|1|L5|C|5025
7QVP|1|L5|U|5026
7QVP|1|L5|C|5027
7QVP|1|L5|G|5028

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LU

60S ribosomal protein L22

Chain SI

40S ribosomal protein S8