HL_7QVP_095
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QVP_095 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.1046
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
7QVP|1|L6|C|89
7QVP|1|L6|G|90
7QVP|1|L6|G|91
7QVP|1|L6|C|92
7QVP|1|L6|G|93
7QVP|1|L6|A|94
7QVP|1|L6|G|95
Current chains
- Chain L6
- 28S ribosomal RNA
Nearby chains
- Chain B5
- Transfer RNA; tRNA
- Chain ML
- 60S ribosomal protein L13
- Chain MQ
- 60S ribosomal protein L18
- Chain Ma
- 60S ribosomal protein L27a
- Chain Mo
- 60S ribosomal protein L36a
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