HL_7QVP_104

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUCCCGCGCGGGG

Length

14 nucleotides

Bulged bases

7QVP|1|L6|U|514, 7QVP|1|L6|C|515

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|U|512
7QVP|1|L6|U|513
7QVP|1|L6|U|514
7QVP|1|L6|C|515
7QVP|1|L6|C|516
7QVP|1|L6|C|517
7QVP|1|L6|G|518
7QVP|1|L6|C|519
7QVP|1|L6|G|642
7QVP|1|L6|C|643
7QVP|1|L6|G|644
7QVP|1|L6|G|645
7QVP|1|L6|G|646
7QVP|1|L6|G|647

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain ML

60S ribosomal protein L13