HL_7QVP_149

3D structure

PDB id

7QVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human collided disome (di-ribosome) stalled on XBP1 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGCCGGGCUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QVP|1|L6|G|4097
7QVP|1|L6|A|4098
7QVP|1|L6|G|4099
7QVP|1|L6|C|4100
7QVP|1|L6|C|4101
7QVP|1|L6|G|4107
7QVP|1|L6|G|4108
7QVP|1|L6|G|4109
7QVP|1|L6|C|4110
7QVP|1|L6|U|4111
7QVP|1|L6|C|4112

Current chains

Chain L6

28S ribosomal RNA

Nearby chains

Chain MG

60S ribosomal protein L7a

Chain Mg

60S ribosomal protein L34

Chain RB

40S ribosomal protein S3a