HL_7QWQ_059

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

7QWQ|1|5|A|4255, 7QWQ|1|5|A|4256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_059 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.2033

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QWQ|1|5|G|4250
7QWQ|1|5|A|4251
7QWQ|1|5|C|4252
7QWQ|1|5|A|4253
7QWQ|1|5|G|4254
7QWQ|1|5|A|4255
7QWQ|1|5|A|4256
7QWQ|1|5|A|4257
7QWQ|1|5|C|4258

Current chains

Chain 5

28S rRNA

Nearby chains

Chain J

Ribosomal protein L11