HL_7QWQ_062

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_062 not in the Motif Atlas

Homologous match to HL_8C3A_060

Geometric discrepancy: 0.1399

The information below is about HL_8C3A_060

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7QWQ|1|5|U|4321
7QWQ|1|5|G|4322
7QWQ|1|5|A|4323
7QWQ|1|5|A|4324
7QWQ|1|5|A|4325
7QWQ|1|5|G|4326

Current chains

Chain 5

28S rRNA

Nearby chains

Chain D

Ribosomal_L18_c domain-containing protein

Chain T

60S ribosomal protein L21

Chain o

eL42