3D structure

PDB id
7QWQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ternary complex of ribosome nascent chain with SRP and NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GUAGACGAC
Length
9 nucleotides
Bulged bases
7QWQ|1|5|U|4976
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QWQ_072 not in the Motif Atlas
Homologous match to HL_8C3A_071
Geometric discrepancy: 0.1161
The information below is about HL_8C3A_071
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64690.4
Basepair signature
cWW-cSW-F-F-F-cWW
Number of instances in this motif group
9

Unit IDs

7QWQ|1|5|G|4975
7QWQ|1|5|U|4976
7QWQ|1|5|A|4977
7QWQ|1|5|G|4978
7QWQ|1|5|A|4979
7QWQ|1|5|C|4980
7QWQ|1|5|G|4981
7QWQ|1|5|A|4982
7QWQ|1|5|C|4983

Current chains

Chain 5
28S rRNA

Nearby chains

Chain B
uL3
Chain P
60S ribosomal protein L17

Coloring options:


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