HL_7QWR_027

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

7QWR|1|5|G|1869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_027 not in the Motif Atlas

Geometric match to HL_5BTM_001

Geometric discrepancy: 0.1271

The information below is about HL_5BTM_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QWR|1|5|G|1864
7QWR|1|5|G|1865
7QWR|1|5|U|1866
7QWR|1|5|A|1867
7QWR|1|5|A|1868
7QWR|1|5|G|1869
7QWR|1|5|C|1870

Current chains

Chain 5

28S rRNA

Nearby chains

Chain I

60S ribosomal protein L10