HL_7QWR_038

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_038 not in the Motif Atlas

Geometric match to HL_4WF9_059

Geometric discrepancy: 0.2501

The information below is about HL_4WF9_059

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7QWR|1|5|G|2578
7QWR|1|5|G|2579
7QWR|1|5|U|2580
7QWR|1|5|A|2581
7QWR|1|5|A|2582
7QWR|1|5|C|2583

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27

Chain g

60S ribosomal protein L34