HL_7QWR_041

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUUCC

Length

6 nucleotides

Bulged bases

7QWR|1|5|U|2707, 7QWR|1|5|C|2709

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_041 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1389

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

7QWR|1|5|G|2705
7QWR|1|5|G|2706
7QWR|1|5|U|2707
7QWR|1|5|U|2708
7QWR|1|5|C|2709
7QWR|1|5|C|2710

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19

Chain X

Ribosomal_L23eN domain-containing protein

Chain u

Isoform 2 of Transcription factor BTF3