HL_7QWR_057

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

7QWR|1|5|A|4251, 7QWR|1|5|A|4255, 7QWR|1|5|A|4256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_057 not in the Motif Atlas

Geometric match to HL_5TBW_056

Geometric discrepancy: 0.2565

The information below is about HL_5TBW_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QWR|1|5|G|4250
7QWR|1|5|A|4251
7QWR|1|5|C|4252
7QWR|1|5|A|4253
7QWR|1|5|G|4254
7QWR|1|5|A|4255
7QWR|1|5|A|4256
7QWR|1|5|A|4257
7QWR|1|5|C|4258

Current chains

Chain 5

28S rRNA

Nearby chains

Chain J

Ribosomal protein L11