HL_7QWR_060

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_060 not in the Motif Atlas

Geometric match to HL_5TBW_059

Geometric discrepancy: 0.1463

The information below is about HL_5TBW_059

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7QWR|1|5|U|4321
7QWR|1|5|G|4322
7QWR|1|5|A|4323
7QWR|1|5|A|4324
7QWR|1|5|A|4325
7QWR|1|5|G|4326

Current chains

Chain 5

28S rRNA

Nearby chains

Chain D

Ribosomal_L18_c domain-containing protein

Chain T

60S ribosomal protein L21

Chain o

eL42