HL_7QWR_070

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAGACGAC

Length

9 nucleotides

Bulged bases

7QWR|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_070 not in the Motif Atlas

Geometric match to HL_5J7L_201

Geometric discrepancy: 0.1179

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7QWR|1|5|G|4975
7QWR|1|5|U|4976
7QWR|1|5|A|4977
7QWR|1|5|G|4978
7QWR|1|5|A|4979
7QWR|1|5|C|4980
7QWR|1|5|G|4981
7QWR|1|5|A|4982
7QWR|1|5|C|4983

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain P

60S ribosomal protein L17