HL_7QWS_041

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUCC

Length

6 nucleotides

Bulged bases

7QWS|1|5|U|2707, 7QWS|1|5|C|2709

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_041 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1473

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7QWS|1|5|G|2705
7QWS|1|5|G|2706
7QWS|1|5|U|2707
7QWS|1|5|U|2708
7QWS|1|5|C|2709
7QWS|1|5|C|2710

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19

Chain X

Ribosomal_L23eN domain-containing protein

Chain u

Transcription factor BTF3