HL_7QWS_057

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

7QWS|1|5|A|4255, 7QWS|1|5|A|4256

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_057 not in the Motif Atlas

Geometric match to HL_5TBW_056

Geometric discrepancy: 0.225

The information below is about HL_5TBW_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QWS|1|5|G|4250
7QWS|1|5|A|4251
7QWS|1|5|C|4252
7QWS|1|5|A|4253
7QWS|1|5|G|4254
7QWS|1|5|A|4255
7QWS|1|5|A|4256
7QWS|1|5|A|4257
7QWS|1|5|C|4258

Current chains

Chain 5

28S rRNA

Nearby chains

Chain J

Ribosomal protein L11