HL_7QWS_070

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUAGACGAC

Length

9 nucleotides

Bulged bases

7QWS|1|5|U|4976

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_070 not in the Motif Atlas

Geometric match to HL_5TBW_070

Geometric discrepancy: 0.1439

The information below is about HL_5TBW_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7QWS|1|5|G|4975
7QWS|1|5|U|4976
7QWS|1|5|A|4977
7QWS|1|5|G|4978
7QWS|1|5|A|4979
7QWS|1|5|C|4980
7QWS|1|5|G|4981
7QWS|1|5|A|4982
7QWS|1|5|C|4983

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain P

60S ribosomal protein L17

Chain d

Ribosomal protein L31