HL_7QWS_077

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

7QWS|1|8|U|124, 7QWS|1|8|C|125

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWS_077 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.3652

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7QWS|1|8|G|121
7QWS|1|8|G|122
7QWS|1|8|U|123
7QWS|1|8|U|124
7QWS|1|8|C|125
7QWS|1|8|C|126
7QWS|1|8|U|127
7QWS|1|8|C|128
7QWS|1|8|C|129

Current chains

Chain 8

5.8S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain X

Ribosomal_L23eN domain-containing protein