HL_7R4X_032

3D structure

PDB id

7R4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

GUG(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

7R4X|1|2|G|1849

QA status

Modified nucleotides: MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7R4X_032 not in the Motif Atlas

Homologous match to HL_4V88_222

Geometric discrepancy: 0.1297

The information below is about HL_4V88_222

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7R4X|1|2|G|1847
7R4X|1|2|U|1848
7R4X|1|2|G|1849
7R4X|1|2|MA6|1850
7R4X|1|2|MA6|1851
7R4X|1|2|C|1852

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain n

60S ribosomal protein L41